rs30176406 SNP Detail

Summary

• ID
  rs30176406
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103365765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGT AGCTACAGTC ACAGTCATCA
  W
  AGCTCACCCT AGATGCCCTG GGAAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46380217	mCV24890938	ABI	CRAMUS_MOUSE	f	SNP	T		A	A
ss136878107	ENSMUSSNP5323752	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
ss323161335	CHEV_9_103390896	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30176406					SNP	T	T	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103365765 () rs orientation: forward

Symbol	Name	Function Class
Gm16252	predicted gene 16252	within coordinates
Rr192235	regulatory region 192235	1636 bp proximal
Rr207116	regulatory region 207116	within coordinates
Tmem108	transmembrane protein 108	within coordinates
Tssr91216	transcription start site region 91216	735 bp downstream
Tssr91217	transcription start site region 91217	755 bp downstream
Tssr91218	transcription start site region 91218	783 bp downstream