rs30176892 SNP Detail

Summary

• ID
  rs30176892
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:47510067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAATCTT AGTCATTTTT
  GAGGTGGGGC ATACCACCGC ATGTGTGTGG GGATGGTCAG AGGACAACTT GCTAGAGTTG
  GTTTTCTTCT TCACTCATGT GGGTCCTGGG GATGGAAGTC AGGTCATTAG GCTTTGCAGC
  AGGCACCTTG AATTGCTAGG CCATCTTGTC AGGCCTCTCA CCCTAGGTGA TGCTTTAAGT
  R
  AGATCTTGAT GAACAGAGAT AGATGGCTTA GCTTAGCAGG ACTTGCAGTC AGCCATGTGC
  TTTATGTATG CACAGTGCTA GAGATGGAAC TCAAGGCCTT GTACATGCTA AACACGCACT
  CCACCACTGA CCTAAAGCCC CAACCTGGGC AAACATTTTG CAAGGACTCT GAAGCTGCAT
  GTTGACTAGT GGTCCTACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss46920982	NES10948086	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs30176892					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46920982	NES10948086	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:47510067 () rs orientation: forward

Symbol	Name	Function Class
Elf4	E74 like ETS transcription factor 4	within coordinates
Rr4086	regulatory region 4086	1734 bp proximal
Rr9784	regulatory region 9784	1268 bp distal