rs30177742 SNP Detail

Summary

• ID
  rs30177742
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:69025717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA AAATCTACAT AAAACATTAA
  S
  CCGGGTGGTA GTGGCAGCAT ATTCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45404025	mCV24616090	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	G
ss135265092	ENSMUSSNP6475633	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320791936	CHEV_3_68922306	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30177742					SNP	C	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69025717 () rs orientation: forward

Symbol	Name	Function Class
Gm37558	predicted gene, 37558	1358 bp downstream
Kpna4	karyopherin subunit alpha 4	Intron
Rr578128	regulatory region 578128	490 bp proximal