rs30178703 SNP Detail

Summary

• ID
  rs30178703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45236063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGTGTCTT CCTTTATTGC
  TGTTCTCCTT ATTTTATTAC TTTAAGACAA GCTCTCTCCT TGAACCAGAA GCTCACTGGT
  TCTGTTAGTC TGTGGCTGAT CAGAGTCGCA GCACCCTTAT CACTAGAAGG ACAGCCACAC
  ACAGCCAAGT CCAGCTTTCT GCCCTCCTGG TCTCCCATGA TGCACCATAA CCTCTAGAAA
  R
  TCCAACAAGC TGTGAATGGC ACACCCAGGG CTTCTCAGGC ACAATCAGGA GCATCCGGAG
  TGGCTGGCAT GCAGCTTGTT TGCTGGGTCA TTGTTACCCT AGAGACCATG GGGATGGGGT
  CAGAAGGAAT GGATGGGATG TAGTGGTGGG AAAGGGCCCA AGTTATCCAG GTGCTAACTT
  TGTCATAGAC ACCTGCCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46380815	mCV24048453	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss136409315	ENSMUSSNP2652839	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30178703					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45236063 () rs orientation: forward

Symbol	Name	Function Class
Rr203899	regulatory region 203899	within coordinates
Rr203900	regulatory region 203900	830 bp proximal
Rr203901	regulatory region 203901	1658 bp proximal
Tmprss13	transmembrane protease, serine 13	within coordinates