rs30178857 SNP Detail

Summary

• ID
  rs30178857
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54568333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAG CTGTTTAGCA CACTGCTCTC
  Y
  CTGAGCCCTA TCTTCCACTC TTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46379579	mCV24161045	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss136506908	ENSMUSSNP3071115	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
ss322965576	CHEV_9_54508856	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30178857					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54568333 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	267 bp proximal
Tssr89653	transcription start site region 89653	617 bp downstream
Tssr89654	transcription start site region 89654	795 bp downstream
Tssr89655	transcription start site region 89655	835 bp downstream