rs30180914 SNP Detail

Summary

• ID
  rs30180914
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:85972255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTCATCA CATCCCTTTC
  TTTAGACTTT ACAGATAGTG ATCTATTACC CTGTCCTGGG TTGTTCCCAA CAATGCACTT
  GTCCTTATGC ATGAGGGGCC CTGAGGAATT CAGTTCTTCC CTCTGAGTGT CTATTACACA
  ATCTTTCCCA ATGGCTATAA ACACCTAGGA GATTAATGGA GCACACTTCT GAGTGTATTT
  S
  CCAGTATATT CCCAGAGCTG ACTAGATCTT GAGACTTTGA CCTAATGAAT AGACCAAGCC
  CTTGGTGGAT TCAAAGCAGG ATGGCATAGC TAGGAGGTGG TAAAATGTCG CAGGTGGAGG
  AAGTGTCCTT GGGGACTGTG TCCTTCCTTG GCCCTTTCCT ATCAGAGTGG CCTTCTGTCT
  CCTCTCCACC ATGATGTGAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47920725	NES12036707	PERLEGEN	MM_PANEL2	f	SNP	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30180914					SNP	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47920725	NES12036707	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:85972255 () rs orientation: forward

Symbol	Name	Function Class
Rr217180	regulatory region 217180	746 bp proximal
Rr229214	regulatory region 229214	947 bp proximal
Rr385055	regulatory region 385055	within coordinates
Syn3	synapsin III	within coordinates