rs30180918 SNP Detail

Summary

• ID
  rs30180918
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:85974064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTG CATTTTATCA TTTTATCGGT
  Y
  TGAGTAGTGT GAGGTACCCA CGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	NZW/LacJ
ss47920733	NES12036666	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	NZW/LacJ
rs30180918					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47920733	NES12036666	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:85974064 () rs orientation: forward

Symbol	Name	Function Class
Rr217180	regulatory region 217180	864 bp distal
Rr229214	regulatory region 229214	within coordinates
Rr385055	regulatory region 385055	1464 bp downstream
Syn3	synapsin III	within coordinates
Tssr94957	transcription start site region 94957	984 bp upstream