rs30183185 SNP Detail

Summary

• ID
  rs30183185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:103226819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTC ACACTACTAG CTACTGACCA
  R
  CCTTTCCCCA ATTTAATCTA TATTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46380858	mCV22613347	ABI	CRAMUS_MOUSE	f	SNP		A	A					G		G
ss52037665	NES15052372	PERLEGEN	MM_PANEL2	f	SNP	A		A	G	A	A	A		A	G	A	G		A	A	A	G		A
ss136877144	ENSMUSSNP3668508	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							G
ss323160944	CHEV_9_103251950	CHEVERUD	SCREENING_POP	f	SNP													G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30183185					SNP	A	A	A	G	A	A	A	G	A	G	A	G	G	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52037665	NES15052372	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103226819 () rs orientation: forward

Symbol	Name	Function Class
Topbp1	topoisomerase (DNA) II binding protein 1	Intron
Tssr91191	transcription start site region 91191	1896 bp upstream