rs30183263 SNP Detail

Summary

• ID
  rs30183263
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:64733746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGAATGGTGA TTCTCCAGAA AAATGGAGGG GCTTTCTGTT TCTGGCTGTA CTCTGTTCTT
  GACACTGTGA GAATTCTTGC AGTTGTGCAG TTTCTTTATG TGTGTTACTC TTTAGTTAAA
  AGGAATCAAA ACGGGCCTGG AGAGATGGCT CAGGGGATGA GAGCACTTGT TGCTTTTGCA
  GAGAACTGCT GTTCGTCCCC AGCACCCACA CAGTGGCTAA CAAACTCCTG TTGAGGAAAT
  CTAATGCCCT CTGCTGAGCT CTGTAGCACC TGGCATGCAT GTGGTACACA CACATTCACA
  W
  GCATTCACAT GTAAAAAAAA TTTAAATTAC AAACAATAAA AACAGGCCTA TGTATGGACT
  AAATTGGGTA GCAAAGCTAA GTGAGCCCCC CTCAGGTTGT GAATTGGGTT TTATCTGCAC
  ATCTTTATGT ATTTTAGAAG AGATTGTTAG CATTAATTAG TTTTTCTAGG GCAGTGCATG
  ACACCTAAGA GGTTAAGAGC CTACATCATG TATCTGTAAA GAAGCAGGCA CATATGTAAA
  AGTTATTTTA TACAGTTCAC TGTGGATAGC ACATTTTAAC TCTGGGATAG AACCTGGCCT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46381367	mCV25282369	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30183263					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64733746 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dennd4a	DENN domain containing 4A			Intron
				Noncoding-Transcript-Variant
Rr681335	regulatory region 681335			1408 bp distal