rs30188589 SNP Detail

Summary

• ID
  rs30188589
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:85971668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACTA GCATCGATCA GTTATACCCC
  R
  CAGGCACTGT GTAAAACAGC CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	FVB/NJ	NZW/LacJ	PWD/PhJ
ss47920719	NES12036704	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	FVB/NJ	NZW/LacJ	PWD/PhJ
rs30188589					SNP	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47920719	NES12036704	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:85971668 () rs orientation: forward

Symbol	Name	Function Class
Rr217180	regulatory region 217180	1333 bp proximal
Rr229214	regulatory region 229214	1534 bp proximal
Rr385055	regulatory region 385055	within coordinates
Syn3	synapsin III	within coordinates