rs30188602 SNP Detail

Summary

• ID
  rs30188602
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70636119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACAGGACA GGGCCTGGGT
  CCAGTTATCT TCTTCACTGG TTGTTTCTAG TGACCTAATT CCTGCTAGGT TTATTCCACT
  GCTTTTGAGC ACAATAGGTG GCCAGGCCTT CAGCAAATAC TCCATTAACA GGTTTGTATG
  ATTACTTTAT TTCTTAACTG ACATTTGAAT GGCTGATCCT CTCTTTAGGT CCTGGTATAC
  R
  GTGGTGAATA CTGCAAAAGT TCATCCATTG GACTTCAAAG TCTAGTGATT CTGTTTATAA
  TTGATCATAA TACAGCAAAT TTTCCTGTTG CTCTGACTCC CATGATCTCC TTCCTGCCAG
  CACTAATCCT TTGTTCCTAA AGGCCAGGGT GAGGGTAGAC TTGCTTGAGT CAGCTCTCCC
  ACCTGTTTCC TGGAAGATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46383523	mCV25010254	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136608714	ENSMUSSNP7157986	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30188602					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70636119 () rs orientation: forward

Symbol	Name	Function Class
Adam10	a disintegrin and metallopeptidase domain 10	within coordinates
Rr201557	regulatory region 201557	within coordinates
Rr201558	regulatory region 201558	1482 bp proximal
Tssr85932	transcription start site region 85932	1073 bp upstream