rs30191736 SNP Detail

Summary

• ID
  rs30191736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44056985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAAAACCAA AACCACCACA CTTATTACAG GACTAGAGAA AAAGCAACCA GAGAAGATAC
  AGGTAGCCTG TTTATAAGAA GCACACAAGA ACAAGCTATT TTCGACACTG AAAATATCCC
  TATTCTAGCA AATGTCCCAG TGTACCTAGG AAAGTAAAGC TAAGGATATC ACTGTAGGCT
  CCCCTTACAG GAAGACAAAG AGGATGGGGA TGCAGAAGAC AGGTCAAGAG CCCACAGAAT
  GAACAGGTAT TCAGCACTAA AACCAGAAGA GAGCCAAGCC AAAGGGTACT AGCTACAGTG
  R
  AAGCCATGGT CTGCACTCTG AGTAACATCA AAGAGACCCG AGGTTGAATG GAGGCTAAGA
  AATGCCACCC AAGGACAGAA GAGTGGCCTC AAGAGTGAGG AAAGCAATCT TGGGTGCCAA
  GACTCCTAGG GAGAAGAAAA GTAATTAGCA GCAAAGGTGA CAGTGACTCT GACTAAGTTA
  AAAATAGGGG CGAAGAGTAG AACAGCAACT GTACTTCCAT TGTGGAAGTT CCTTTGCATA
  TCTCTTCTAA GTTCCCAGTT CACCATAATT TCTCTGTTCT CCCTATAGGT TCAGTGGGGG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46383829	mCV24938863	ABI	CRAMUS_MOUSE	f	SNP	A	G					G		G
ss47686442	NES11345015	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G		G	G	G	G	A	G	G	A	G
ss136391649	ENSMUSSNP4792257	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30191736					SNP	?	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686442	NES11345015	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44056985 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	within coordinates
Rr677565	regulatory region 677565	1382 bp distal
Rr677566	regulatory region 677566	1047 bp distal
Rr677567	regulatory region 677567	1126 bp distal
Rr677568	regulatory region 677568	1680 bp proximal
Rr677569	regulatory region 677569	1795 bp proximal
Tssr89112	transcription start site region 89112	1140 bp upstream
Tssr89113	transcription start site region 89113	955 bp upstream