rs30192955 SNP Detail

Summary

• ID
  rs30192955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62322088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTG GACTAAACGG CACAGAGAAA
  Y
  ACTCTGCAGT TTCTTAAGAC TGTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46383748	mCV23519844	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss136549590	ENSMUSSNP5180118	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss322982317	CHEV_9_62262613	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30192955					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62322088 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21896	CpG island 21896	641 bp proximal
Gm40523	predicted gene, 40523	within coordinates
Rr1154	regulatory region 1154	within coordinates
Rr196313	regulatory region 196313	1288 bp distal
Rr196314	regulatory region 196314	688 bp distal
Rr196315	regulatory region 196315	913 bp proximal