rs30193560 SNP Detail

Summary

• ID
  rs30193560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:33958650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGC ATTTGTGCCC CTCCCTTTGG
  Y
  TATACTGAGA CAATCGGTGC CAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39159398	mCV24440566	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss139267647	ENSMUSSNP5519737	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30193560					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:33958650 () rs orientation: forward

Symbol	Name	Function Class
Rr490523	regulatory region 490523	1088 bp distal
Rr490524	regulatory region 490524	1449 bp distal
Shld2	shieldin complex subunit 2	340 bp downstream