rs30194038 SNP Detail

Summary

• ID
  rs30194038
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70349202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTGAAGG AAACAAAAAG
  TACTTCTGAA GTCGCCTTTC AATTTTTAAA GTAAAGGAGA AACTGAGGAC CGAAGCTCAC
  TGGTAGAATG CTTGCCTGGT GAGCCTGGGT TCAATCCCAG GCACTACAGA AAAAGGGAGG
  AAATTGGATG TAACAACGAA TGAATCAGAA ATGATAAAGG TAAGGGAGCA ATTACATCAA
  Y
  TAAATAATAT AACAGTCTTT TCAGTTTGTA CCCAAAACTG GTCATCAGTA AAGAGACTAA
  ATCAATTTTA AATATTAATG ATAATTGTTT GAGAATCTCC ATTTGGTAAA CAGGAAGGAG
  TCACTGGAAC ACATGGATAA GACAGAAATT TCTGGCAGAT TGATTGTGAA AGACCCAACA
  AAGATAGCAG AGCTCATGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39159799	mCV24339226	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss139680845	ENSMUSSNP7129367	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30194038					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70349202 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494844	regulatory region 494844			649 bp distal
Rr494845	regulatory region 494845			667 bp distal