rs30199548 SNP Detail

Summary

• ID
  rs30199548
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:33019072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAT TGCTTTATTT AGGAACAGGG
  S
  CTGGGGGGGG GGCAGCTCTG AAGTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45404120	mCV23043005	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
ss134753401	ENSMUSSNP1997565	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30199548					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33019072 () rs orientation: forward

Symbol	Name	Function Class
Gm37459	predicted gene, 37459	within coordinates
Pex5l	peroxisomal biogenesis factor 5-like	Intron
Rr575039	regulatory region 575039	706 bp proximal
Rr575040	regulatory region 575040	788 bp proximal