rs30199895 SNP Detail

Summary

• ID
  rs30199895
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61314460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGTTTATAT TCCATTGGAG ATTGTTGTCT
  TTAGATTAGT TAAGCTTTCT GCGAGTAGAG TCTTTGTTCT ATTCATCCAT TGCCTCATGG
  GTTTATTTAT GCAGGCAGTG TTCAGTATGT TGGTTGGCCA TCCAGGTTCT CTCTCTCTCt
  S
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg cgtgtgtgtg attcttctct catcataacc
  acagtttctt ttccctccac tccttcgacc tccccccact tcccctttcc tccagaccta
  cttctttttg tttcccttca gaagaaagca                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45404487	mCV24499761	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss45412862	mCV24499773	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss45419713	mCV24499762	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss45461240	mCV24499774	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss45529159	mCV24499763	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss320787902	CHEV_3_61210961	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30199895					SNP	G	G	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61314460 () rs orientation: forward

Symbol	Name	Function Class
Gm40061	predicted gene, 40061	within coordinates
Rr72571	regulatory region 72571	140 bp proximal
Rr81199	regulatory region 81199	1542 bp proximal