rs30201777 SNP Detail

Summary

• ID
  rs30201777
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79423205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAC CTACTCTATA CCCCCTCACA
  Y
  GCTCACTTCC AAGTTTTATT GAGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45404410	mCV24186428	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss135372407	ENSMUSSNP888543	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T		C
ss320811445	CHEV_3_79319820	CHEVERUD	SCREENING_POP	f	SNP						T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30201777					SNP	C	C	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79423205 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	within coordinates
Rr77764	regulatory region 77764	395 bp proximal
Tssr33701	transcription start site region 33701	431 bp downstream