rs30202012 SNP Detail

Summary

• ID
  rs30202012
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153513199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTATTCC CTTCATCGAT
  GGTTTAACTC AAACCTCATG AGGGGCACAT GAAAGCCAAG GAGTTTAAGT TGTTGTGGAG
  ACATTAACTT CACACTAGGA ATGAGCTCAG AAAGGTTAAG TAAGTTTCCC GAACTCACAC
  AGCTTGTTTG GTGGTTTGAA TAAGAACGGC CCCCATAGAA TACTTGGCTC ATAGAGAGTC
  R
  CACTTTTAGG AGGTGTAGCC TTGTTAGAGG AAGTGCACCA CTGGGAAGGC GGGCTTTGAG
  GTCTGAGGTG CTAGACCTAG TAGGTCAGTC TCCTGCTGCC TATGGTCAAG ATATAGACTT
  CTCAGGTCCT TCTCCAGCAC CATGTCTGCC TGCAGGCTGT CACACTTCCT GCCATCATGA
  TAATGGACTG AAACTCTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45405515	mCV24023731	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss136113450	ENSMUSSNP326353	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30202012					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153513199 () rs orientation: forward

Symbol	Name	Function Class
Rr587763	regulatory region 587763	235 bp distal
Rr587764	regulatory region 587764	993 bp distal
Rr587765	regulatory region 587765	within coordinates