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rs30204046 SNP Detail
Summary
  • ID
    rs30204046
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr14:32978948 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCACTACATG TGGCCCCTCT
    GTGACCAAAC TGTTGTTGTG CAGCACAGGC AGGACTGTAC AAAGATAGAA TGTGGCTTCC
    TCTTTGGGTA AGGGTAGAAG GTGAGGAACA TAGGCTCTGG AGTCATGCCC GAGGCTTGTA
    GGATTCCTGG AGATGCTGCC AGGGAATGAT AACCCAGAAG CCACCTGATT CATATCAGCC
    R
    GCCAGGGAAG TGTTCCGAAC CCTGGAGGTC CTCTTCCTTA AGGGAAGCGT GTGGGTCCAT
    AGCCCACTCT AATTGCTAAG TTCTGAATGT TGTGCCTTTC CAGAAAATGC CCATGAAGAC
    CCAGTGTTGT ATATGCCCAA GTGGGCCAAA TATACTGAGG GTTTCCTAGG AGAGGTCACA
    TTCATGGCCT GTGAGTGAGC                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss39161462 mCV22706758 ABI CRAMUS_MOUSE f SNP A G G G
ss139248754 ENSMUSSNP2759161 ENSEMBL ENSEMBL_Sanger f SNP A G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs30204046 SNP A G G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr14:32978948 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Arhgap22 Rho GTPase activating protein 22 within coordinates
D14Mit175 DNA segment, Chr 14, Massachusetts Institute of Technology 175 642 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory