rs30206172 SNP Detail

Summary

• ID
  rs30206172
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:34760509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACAGCAT TCCTTAAGTG TTTCATTAGG ATGAACTGAA
  CTAGCCGGGG CGATGGAGGC TTTAGCATTT AGGAACAACT GGAGTCCATC AGGAAAGCCT
  R
  CTTGAGCAGG CTCCAGGGAG GATTGTAGCT ACTCGTCCGG TCCAGGAGAC GGAGGGCAGA
  AACAGTGTGG CTTCTGAGAG ATCGGTCTCT TTCTAGATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39657828	mCV22875743	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss146941899	ENSMUSSNP3633675	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30206172					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:34760509 () rs orientation: forward

Symbol	Name	Function Class
Kif20a	kinesin family member 20A	within coordinates
Rr352687	regulatory region 352687	1108 bp distal
Rr353827	regulatory region 353827	892 bp proximal
Rr353828	regulatory region 353828	1563 bp proximal