rs30208354 SNP Detail

Summary

• ID
  rs30208354
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139436198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCTAAATT GAATGCAACT ATGTGTGTAA GTCTCTAAAG
  CAAGAACTCT TCAGTTACCT CCAGCCTTCT CATTAGCCCT CTCCTGTGCA TCCCAGTGCA
  Y
  TTCCATCTGG CTTCACATAG TCAGGTTCTG GAATGCCCTC AACTCCTATG AGGGGCAGGA
  GCCATCTTTG ATCTAATTCT CCCTCCAGAA TTTTCCCTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45903906	mCV25279825	ABI	CRAMUS_MOUSE	f	SNP		C					T	C
ss48128497	NES11845215	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T	C		C		C	C	T	C		T
ss133916352	ENSMUSSNP2266547	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
ss322019557	CHEV_6_139407721	CHEVERUD	SCREENING_POP	f	SNP									C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30208354					SNP	T	C	C	C	T	C	T	C	C	C	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48128497	NES11845215	PERLEGEN	MM_PANEL	f	SNP	C/T