rs30209144 SNP Detail

Summary

• ID
  rs30209144
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112260565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACTC AGGGAGGTTA GAGAAGCCTC
  Y
  CCAAGAAGGC AACATGAGTT GTGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45904606	mCV22774647	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss133559942	ENSMUSSNP5223271	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30209144					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112260565 () rs orientation: forward

Symbol	Name	Function Class
5031434C07Rik	RIKEN cDNA 5031434C07 gene	1989 bp downstream
Lmcd1	LIM and cysteine-rich domains 1	within coordinates