rs30209302 SNP Detail

Summary

• ID
  rs30209302
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:75150940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTA TGAGTTGTCC TGTGCTGTGG
  Y
  CTGCACATAC TGCCTCCAAT AAACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39657580	mCV23942567	ABI	CRAMUS_MOUSE	f	SNP	T	T	T
ss147488236	ENSMUSSNP2190333	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss325690719	CHEV_18_75177523	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30209302					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:75150940 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10229	CpG island 10229	669 bp proximal
Dym	dymeclin	912 bp upstream
Rr405742	regulatory region 405742	585 bp upstream
Rr540715	regulatory region 540715	422 bp proximal
Rr540716	regulatory region 540716	938 bp proximal
Tssr151951	transcription start site region 151951	822 bp upstream
Tssr151952	transcription start site region 151952	840 bp upstream
Tssr151953	transcription start site region 151953	1054 bp upstream