rs30210397 SNP Detail

Summary

• ID
  rs30210397
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:37088288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATA AGAGAAGTCA CGAAGTTCGA
  Y
  GCAGTCTCTG GTTAGTACAC CTGTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46384098	mCV24874263	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss136309007	ENSMUSSNP441719	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss322906199	CHEV_9_36984577	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30210397					SNP	C	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:37088288 () rs orientation: forward

Symbol	Name	Function Class
Gm67648	predicted gene, 67648	within coordinates
Rr401317	regulatory region 401317	95 bp upstream
Rr676635	regulatory region 676635	572 bp distal
Rr676636	regulatory region 676636	within coordinates
Rr676637	regulatory region 676637	267 bp proximal
Rr676638	regulatory region 676638	412 bp proximal
Rr676639	regulatory region 676639	1588 bp proximal