rs30212288 SNP Detail

Summary

• ID
  rs30212288
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79517180 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTATTTCT CCTTTCAAAT
  TAGTATTTAC TATTCAGAAT TTCATGGAGA TATACAATGA AATGTGATCA TATGTACATT
  TCCTATTCCC TTATAAAAAT TTCAAATATT TCAACACAAC CCTCACCCCC TTTCAACTTC
  ACGTTATTTT ATTACTTCTT CAGCCTATGA AGATCACTTA GTGCTACAGC TTTTTTCCAC
  R
  GGTGTGGGTC CATGCAGTGA AGTATGGGAT TTCTACCTCT TTGCATATTA TTTAAAAAAC
  ATATTCTCCC TCTCCCAGCA GCTATCAGCT GTCTGTAAGT ACCTCAGGAC ACAGGACTGG
  AATTGTCTGC ATCATCTATA TGAGAATGCT GGATTGCTCT TAAACTCTTT TTCTATACTC
  TTTCTCTCTC TCTTTTGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45904253	mCV24116076	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss133324552	ENSMUSSNP3592497	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30212288					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79517180 () rs orientation: forward

Symbol	Name	Function Class
Gm6261	predicted gene 6261	1011 bp upstream