rs30212516 SNP Detail

Summary

• ID
  rs30212516
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138346043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTA ATGTTCATCA CAGAGGAGGC
  R
  CTCAGTAAGC ACCAACAGCT GTGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J
ss45406576	mCV23933602	ABI	CRAMUS_MOUSE	f	SNP	G	G	A			A		G
ss46998814	NES10883050	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A		G	G	A		G
ss135955719	ENSMUSSNP1040558	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					G
ss320980819	CHEV_3_138303246	CHEVERUD	SCREENING_POP	f	SNP										A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J
rs30212516					SNP	G	G	A	A	A	A	G	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998814	NES10883050	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138346043 () rs orientation: forward

Symbol	Name	Function Class
Gm65687	predicted gene, 65687	1276 bp downstream
Rr586170	regulatory region 586170	839 bp distal
Rr586171	regulatory region 586171	1850 bp proximal
Rr586172	regulatory region 586172	1936 bp proximal