rs30214426 SNP Detail

Summary

• ID
  rs30214426
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127684643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCATTCC CATTTTTTTG
  GCCCTGGCAT TCCCCTGTAC TGGGGCATAT AAAGTTTGCG TGTCCAATGG GCCTCTCTTT
  CCACTGACAT TTTAAGGCAG ATAATACTTT GCTGTGGTAT TGGTTCCCTT CTATCACTTT
  GACCAAAGTC CTTGATATAA ACACCTTAAA GGACAAGGGT TCATTTTGGC TCACTGGTTG
  K
  GATTTAGGAT GCAGAGGGCA TGGGAGAGAA GTTTACATCA GGCAGCCAGA GCAGACAAAA
  GAGGCCTCTA GGAAGGGGTT TTCCTCAGCT CCCAGTGTTA TCACATTATG AATCCATCTG
  GGTGAGAGCT TTATGATCTA CCTCTAACCT TCTGTGACCT TGCAGACTAC CCAGAGGTAT
  GTTTTACCAG TGTTCTAGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45407168	mCV23455393	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G
ss135874325	ENSMUSSNP422753	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		G
ss320957939	CHEV_3_127593912	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30214426					SNP	T	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127684643 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	1070 bp distal
Rr584893	regulatory region 584893	673 bp distal
Rr584894	regulatory region 584894	within coordinates