rs30214517 SNP Detail

Summary

• ID
  rs30214517
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32113129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATTAAAAC CATTGAAGAA CTTTTAAAAC ATCCTGAAGA
  TACATTATAT TCCACAGTTC TCAGGCCCTC TGTAAAGCAA GTATAAACAT CAAATATTTT
  W
  AAAATAATTC TAGTGTGTAG CCAAGCATGA GAACCATTAA AATAACGACA TCTGTGCTTT
  GTAGAGTAAG GTGTTTCTAA GACCCTGGGT CCTCCTAAG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45407733	mCV24277912	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	A
ss134744624	ENSMUSSNP2910503	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		A
ss320696676	CHEV_3_31957902	CHEVERUD	SCREENING_POP	f	SNP						A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30214517					SNP	A	A	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32113129 () rs orientation: forward

Symbol	Name	Function Class
Kcnmb2	potassium large conductance calcium-activated channel, subfamily M, beta member 2	within coordinates
Rr80380	regulatory region 80380	673 bp proximal