rs30214645 SNP Detail

Summary

• ID
  rs30214645
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:59306401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACCCTGG GATACTTTGC
  AGTGGGGTGT TAACTCCACC TAGACATCAG TGTCTGCATA ATAAACTCTG TGTCAGGAGG
  CAGCAATTAT CTAGCTGGAG TCTCCAAGTC CAAAGCTCTG TGCTTTGAAC AGTAGGCAAT
  ACCTTATACA TGCTTGTTAA ACAGATTAGT AAATGGAGTT AACTTTCTTC ACGATTATTC
  K
  AAACGAGTCC TGAGTGAGTT ATCTGTACCT AATGAGAATT AATGGCTTTG TAGACTAGCC
  CGTTTGAATG AAGAGCAGCT AGGAGCTTGC AGGGCAGTTT GCTGATGTGT AAGCAGATGT
  GGTTCTCAAC CACTAACCAC ACGAAATTGG GAAACTCTGA AAATGTACTA CCCATTGTAG
  CAGTAGCTGA CCATACGGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss39659354	mCV23241570	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss147209003	ENSMUSSNP4385577	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30214645					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:59306401 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10086	CpG island 10086	1335 bp proximal
Gm54033	predicted gene, 54033	within coordinates
Gm58413	predicted gene, 58413	within coordinates
Rr538516	regulatory region 538516	1831 bp proximal