rs30214917 SNP Detail

Summary

• ID
  rs30214917
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145656007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAAAAGAA CACTCCAGAA
  GAAAAAAAAA AAAAAAAAAA AAAAGCAAGT AAACCGGCCC CTCCCCTCCA CTCCCGCAAC
  TTTTATTTTA CTAAAACAGG GTGGCAATTA GCAGAGACAA ACCTTAGGTG GAGCTAGAGG
  CTGCTAAAAA ACTGGCAACT GCCTGGAGCG CTAGAGCATC CCTTAGATCC GGGTTTTCCT
  Y
  GCTGCTGGAG GCAGCCTGAG CTACCCCGAG AAGAGAGTAC AGGCACTTCT CCCCGCTCCT
  ACAGAAGGAT GCCACCTGCT CATCCCGGTT TGAAGGGCTG AGGAAATCTC TCAGCCCCAG
  CTCCTGATAG AGTCTGTCTG AGGGTTAAAA AGCAGTGCCC AAGAGAGGAT CTCTCAGGAG
  GAGTAACAGG ACCCAGTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45407642	mCV23511579	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	T
ss136040861	ENSMUSSNP5772071	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
ss321009184	CHEV_3_145613216	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30214917					SNP	C	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145656007 () rs orientation: forward

Symbol	Name	Function Class
Rr586881	regulatory region 586881	within coordinates
Rr586882	regulatory region 586882	1028 bp proximal