rs30215858 SNP Detail

Summary

• ID
  rs30215858
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37719125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTCTGTC ATCTGACAGG
  AGTGTGTGAG GGTATCATTG TACCTCCAGG GTTTGTTCAG ATTCTTGTTC TTCCTGTGCT
  GTCCCACTGG TGGTGTTTCC TGACTGTGCA TCTGACCTGC TTTGCCTGTT GTCCGAGTGC
  AGACAAACTC CTTGATGAGA CAGATCCTTG GTGTCAACCC GACCACACCT GTTGGGCAGC
  R
  ACTGAGGAAT GGTACTTGCT ATTTATTCAT AAGATGCATT GGTGATGTAC AAAGTTCTTT
  ACTTTTCTTC TCTTACATGA AACTCAGACA GGAAGTTCTC TGGTCTCTGT ACTTCTGTTT
  CCTACTCAAA TGAAGCCCAC CCCATCCAGT CTTCCCTCAG TGTGCTCTGT GGGGACAAAG
  GTTCAGCTGT CTTCAAAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45408146	mCV25186167	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss134810539	ENSMUSSNP4586562	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30215858					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37719125 () rs orientation: forward

Symbol	Name	Function Class
Rr575535	regulatory region 575535	1312 bp proximal