rs30218671 SNP Detail

Summary

• ID
  rs30218671
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86183104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAAGCAGGC AACAGAGTCA GGGTAAGTCC CCACTCTAGT
  TTTTGGGAGA CCCACATGAA GACCAAGCTG CACATCTGCT ACTTATGTGC TGGGGATGGG
  R
  GTGGGGTTGG GGGAGCTAGG TCTAGCCTTT GAATGCTCTT TGTGGTTTAG TGGTTAAGAA
  CGTTGGCTGT TCTTCCAAAG GAAGGCCACT TCTTAACTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45408079	mCV24142031	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135445832	ENSMUSSNP912062	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320829512	CHEV_3_86079719	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30218671					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86183104 () rs orientation: forward

Symbol	Name	Function Class
Gm26343	predicted gene, 26343	435 bp upstream
Lrba	LPS-responsive beige-like anchor	within coordinates