rs30220080 SNP Detail

Summary

• ID
  rs30220080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18793113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAATCTAA GGCCTACCAA
  CTTTAGAAGT TGATCTGTGG AAAATATGGC TATCTTGCCA AGTGCAAGAG AAATTATAAG
  TGTCAAGGCT GGACAAACAA GGTACTAAAA ATTGTCTATT GCAGATTCAG ACATGGATTC
  TTTGAAGGAA CCACACCTCA ACCCAAGAGG GCAGCTGTTG CAGTATCCAG TTCATCTTGA
  R
  GGTTTCAGTC AGTCATAAAA TAAATGTTTG GGTTCCAATC AAAACAAACA AACAATGACA
  ACAGAAAAGC AGCTGAAAAC CTCAAATGAT TGAATCCACA AGTAGACAAA TTAATCTCAA
  AAGAAGAATT ACAAATATAT TACCAATAAG TGCAAGACAA AATATTCATC TTTATAAAGA
  GAATGTAAAC CAAAAGTATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45906441	mCV23957258	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss133041138	ENSMUSSNP3278932	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30220080					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18793113 () rs orientation: forward

Symbol	Name	Function Class
Gm43228	predicted gene 43228	within coordinates