rs30221164 SNP Detail

Summary

• ID
  rs30221164
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50619308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTGCATA TGGACGAAGC
  TGCTCACTTG CTCTTCACTA TAGTCTTCAT TCCCTTGAGA CAGATTTGGG GGTCTTGTTT
  ACTTGGACTA GGGTGGCAGT CAGCGAGCAC AGCGATCCTC TGCCTCCACC CCCACGTGCT
  GGAGTTATAG GTACTCTTGT GACCATGCAT GGCTGTATAA ACATGAGTCC ATGGTGATGT
  S
  TAAACCTCAT GCTTACACAT GAACCATAAC TGAACGGTCT CCTCAGCCCT GTTGCAGTTA
  TTTCAGGCTG GTTAAAAACC TGGAACTTGG GAAAATAAAA ACACATACTG ACACTGCTTC
  CATGTTCATG GAATACCTCT GGAAATAACG GAAATAACCC TGGCTGCCAG GATGGAGGAT
  GGGTAACTGT GGTGGCTAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss46384895	mCV25205307	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
ss136479787	ENSMUSSNP218346	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30221164					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50619308 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates
Gm51674	predicted gene, 51674	1338 bp downstream