rs30222718 SNP Detail

Summary

• ID
  rs30222718
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51262945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAA GATGTATATA ACCTTGCTGA
  R
  GTACTTAATC ACCTGTTGTG TTTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45408654	mCV24462600	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss135172851	ENSMUSSNP91508	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss320762388	CHEV_3_51159446	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30222718					SNP	G	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51262945 () rs orientation: forward

Symbol	Name	Function Class
Rr576282	regulatory region 576282	1554 bp distal
Rr576283	regulatory region 576283	1950 bp distal
Rr576284	regulatory region 576284	1291 bp distal
Rr576285	regulatory region 576285	239 bp distal
Rr576286	regulatory region 576286	1534 bp proximal