rs30223203 SNP Detail

Summary

• ID
  rs30223203
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72688480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGACAGCAG TACTGTAGGG AACACATTCC TGGAGGGAGA TATGGGTTCC CCTGGCCAAG
  TGGCCTTCTC CTGAGGAGCA GAGGGTCTAA TGAGATAAAA TGGGCCAGAG CAGCAGGAAG
  CCAGTTCCAT CTTTCCCCCA AGTCTTCAGA AGAGACTGAT CAAAGGGGAA TGGGTATTTG
  TGAAGAGCTG AGAAAACTTG AAAGAACATC CGAGTGGATC TGGATATTTG TTTCTGTTTG
  TCAGGTTTCT GGGGGAGTCT GCCTTTTCTC CAGCCACTTC TCCCCAAGGG TGTAGCTTTT
  Y
  TAGATGCTAA GGTGTGTGTG TGTTTGTGAA CTCGAAAAGA ATATATATGT AAGGAATCTA
  TATCTATTTC TCTAATTCCA GATAATAATT CGGGAGCTTA CCCTGTGTTC CTTTATGAGC
  TGAGGAAAGA GCTGGAGAGT CCCATCAGAT TTCGCCATTT TTAATATCTA CAAAAGCAAA
  CCTTTTCAAC AATGTTCTTG TCTGTCTCTT TGGCCTCCAA AAGAAAGGCT CATGCTAAAG
  AGAAACCAAA TTGTGCTTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGCATTGAG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss46384625	mCV23625317	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs30223203					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72688480 () rs orientation: forward

Symbol	Name	Function Class
Gm27204	predicted gene 27204	1990 bp upstream
Gm68819	predicted gene, 68819	within coordinates
Rr197252	regulatory region 197252	1080 bp distal