rs30223512 SNP Detail

Summary

• ID
  rs30223512
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16059787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTCCCCTG AGAGGCTTTG CCAGAGCCTG ACCAATGCAA
  ATGTGAATGC TCACAGTCAA CCATCAGGCT GAGAATGGGG ACCACAAAGG AGGAGTTAGA
  R
  GAAGGACTGA AGAAGCTGAA GGGAATTACA ACCCCATAGG AAGAATAGCA ATATCAACAA
  ATCAGAGCCC CCAGGGCATC AAGTGGAGGG GATCCCCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45408737	mCV22654063	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30223512					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16059787 () rs orientation: forward

Symbol	Name	Function Class
Gm5150	predicted gene 5150	within coordinates
Rr374567	regulatory region 374567	521 bp downstream
Tssr32658	transcription start site region 32658	705 bp downstream
Tssr32659	transcription start site region 32659	721 bp downstream
Tssr32660	transcription start site region 32660	758 bp downstream