rs30223888 SNP Detail

Summary

• ID
  rs30223888
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:4824553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTC CCATACTCCA GTGTGCACCA
  R
  AATCTGCTGG AGGCTCATTC TACAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39164266	mCV24328753	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss139164421	ENSMUSSNP6529945	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
ss324563580	CHEV_14_18477657	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30223888					SNP	G	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:4824553 () rs orientation: forward

Symbol	Name	Function Class
Rr288845	regulatory region 288845	1153 bp distal
Rr389176	regulatory region 389176	within coordinates