rs30225768 SNP Detail

Summary

• ID
  rs30225768
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72503042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGTTCAAG ATCCAGGAAA
  TTGACATTGT CAGCAAACTT CTATGACCAG GAAAAGTGTT TAACTGTTCT TTTATCATTT
  GGCACATCTA TAAAATGAAA TAGAGTGAAA CTGCATAAGG TTTATTTTAG TCTAAAATTA
  TAAACTTGTC TGAAGTAGAA AATCTTGAAA AATTGTCCAG AGATGTCTTG CTAGTTTCCT
  W
  AAAAAAAAAA AAAAAATTTT TTTTTTGTTT TTTGTTTTGT TTTTTTGAGG CAGGGTTTCT
  CTGTATAGCC CTGAGTTAAA AGAAATTTTT AACAAGTGAT GTGGTTTTTT TAAAGTTTGT
  TTATTTATGT ATTTTATGAA TATGGGTGCA TTGTCTGCAT GCATTTCAGA AAAGGGCATC
  AGATCTCATT ATAGACAGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46385789	mCV23623908	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss136622586	ENSMUSSNP5901842	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30225768					SNP	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72503042 () rs orientation: forward

Symbol	Name	Function Class
Gm37105	predicted gene, 37105	within coordinates
Rfx7	regulatory factor X, 7	within coordinates
Rr682776	regulatory region 682776	1250 bp distal
Rr682777	regulatory region 682777	877 bp distal