rs30226386 SNP Detail

Summary

• ID
  rs30226386
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62320014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTTCATGA TCCAGTTATA TATGTATGGT AGGAGGAGGT
  GATGAGTGTG GGCTTTGGAA ATAAGCAATC GTTGACTCCA TAGCTCCTGA GGCACTCCCC
  S
  CTCTCTGCCT CCCTGTCTCT GTCTCACTCT CTCTCCTTTT TTAAAAAGAC AGGTGAGCAT
  TACCATCCAG CTTATGCAAT GCTGGGGATC AAACCCAGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46384379	mCV23519810	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss136549509	ENSMUSSNP4156798	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss322982289	CHEV_9_62260539	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30226386					SNP	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62320014 () rs orientation: forward

Symbol	Name	Function Class
Gm40523	predicted gene, 40523	1605 bp downstream
Rr1154	regulatory region 1154	1917 bp upstream
Rr196313	regulatory region 196313	587 bp proximal
Rr196314	regulatory region 196314	1187 bp proximal
Rr201157	regulatory region 201157	213 bp distal