rs30227435 SNP Detail

Summary

• ID
  rs30227435
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121744320 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCC TCCATCACGC TGTCCAACAC
  K
  GGAGTGTGTT TCAGGGCACT GGGAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46384870	mCV23340111	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss137070850	ENSMUSSNP156542	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
ss323232579	CHEV_9_121824372	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30227435					SNP	T	T	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121744320 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	within coordinates
Tssr92081	transcription start site region 92081	553 bp upstream
Tssr92082	transcription start site region 92082	390 bp upstream
Tssr92083	transcription start site region 92083	70 bp upstream
Tssr92084	transcription start site region 92084	1034 bp downstream