rs30227645 SNP Detail

Summary

• ID
  rs30227645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82930332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTG CTTTTATTAT GCAGGTTCTC
  R
  TTCTATACCA GAAGACTAAC ACAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45907973	mCV23177976	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss133345731	ENSMUSSNP4470649	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss321843722	CHEV_6_82903345	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30227645					SNP	A	A	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82930332 () rs orientation: forward

Symbol	Name	Function Class
Gm19287	predicted gene, 19287	215 bp downstream
M1ap	meiosis 1 associated protein	within coordinates
Tssr57262	transcription start site region 57262	608 bp downstream