rs30228856 SNP Detail

Summary

• ID
  rs30228856
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121268308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCC AGGGCCGGTG TTGAGACCAT
  M
  TGAGCCTCAT GATCATCCTT CAGAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss46926387	NES10673011	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	C	A		A	C	A
ss135721876	ENSMUSSNP2928312	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss320903679	CHEV_3_121177577	CHEVERUD	SCREENING_POP	f	SNP								C				C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs30228856					SNP	A	C	C	C	C	C	A	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46926387	NES10673011	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121268308 () rs orientation: forward

Symbol	Name	Function Class
Rr584089	regulatory region 584089	8 bp proximal
Slc44a3	solute carrier family 44, member 3	Intron