rs30229610 SNP Detail

Summary

• ID
  rs30229610
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32627573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTACCCATC TCAGAGGGGA
  CTACGGAGGG CAAGCCAGTT CTACACTTGG CGAAAGAGAC CTGTTAGATT GAGAGGGAGC
  AGGATGAGCA AAAGAATAGC TCATTCCTCA GCAGGCAGCC TTTGTGGTGA CCTCATCTTC
  CTCCTAGCTC TGGTCCAGTT GGAGCTATGC ATACAGGGCA GACTTCCAGT TCCTCCTGTC
  W
  GGGACTCACA GGGGCAGATA TAAATAGACC AAGACTTTGT CTGTAACCAT TGTTCTCTGG
  CTGCCCATTG TTTCTGGTGC TGAAGCCTAC CCCCTCCCAC CACCATTGCT CCTGCCCCCG
  ACTCACTCTC ACTGTGCAGA AGTTTGAATT TCAGCCTGGC TATTTTCATT TGCACTTGTC
  TGGTGCTTGG GGAGACCAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46385732	mCV22734128	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	T
ss136250135	ENSMUSSNP1700826	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30229610					SNP	A	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32627573 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr368708	regulatory region 368708	988 bp upstream
Rr676235	regulatory region 676235	703 bp distal
Rr676236	regulatory region 676236	within coordinates
Rr676237	regulatory region 676237	1059 bp proximal
Tssr84287	transcription start site region 84287	482 bp upstream
Tssr88694	transcription start site region 88694	1831 bp downstream