rs30230460 SNP Detail

Summary

• ID
  rs30230460
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67620304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTGCTGG GACCGCTTTA
  CTCTCGGGGA CCATGTAGTT ATTAGGGAGC TACTCCAAAC TTGCCCATGA GAAAACAAAC
  AGAAGATCAA AATGTTTAGG AGACCATTTC GCTCTTCCTG CAAAGTGGCA AAACCTGAAG
  GAAAAGAGAC CTTTGTCCTA AGCCTAGCAC TTTACCAACC AATGCACATA CTGCGCCCCC
  R
  CCCCCCGACC TGTTGTGACC AGAGTAAATG GAAAGCTAAC CTTTTTATTT ATTTATTTAT
  TTATTTATTT ATTTATTTTC TGGTGCTGAC CTCTTTGAGC TTTAGGAAAA CTTTTTAAAG
  AGCAAAATCA AGAAGAGTAT GAAAGAAAAC AAGGCGGCCC AAGCTTGTCC CTCTCTTCTG
  GGCTCCTTAG AGAGCTTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46385065	mCV25294123	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136584936	ENSMUSSNP6901286	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss322992312	CHEV_9_67560829	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30230460					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67620304 () rs orientation: forward

Symbol	Name	Function Class
Gm67856	predicted gene, 67856	423 bp upstream
Rr681959	regulatory region 681959	998 bp distal
Rr681960	regulatory region 681960	1273 bp distal
Tssr90351	transcription start site region 90351	470 bp downstream