rs30231123 SNP Detail

Summary

• ID
  rs30231123
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121285891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTTCCCG TCTCCTCTTT
  CTTTTTCCTT TGGTTTACTT TTCCATTGAG ATTTATAAGC TTTAGATGCT TACGAGAGCA
  AGATGCTGAA GAGGACACCT GCTTCCCATC TGCCTAGGAA AGAAATGATT CACAGGCTGC
  TGTAAACGGG GCTGCTCCTC CAGGTACTGA AGTCTGGGTT CAGGTATCAG ATTTCTGAGC
  R
  GGTTTCACGG CAGTGGGATA AATCATTTGG GACAGGGGAA CTGGGGTCCC TGACTTCCCT
  CCCAAGTCAC AAGGCTAAGC TCTGCAGGGC TTGTCTGCAG GAGGACACAG AGGTTTAGAA
  GCTGGGTTAT CACATGATGA GAGAGGGAAC TTTAAAAAAA AAAGGTCCTT TGAACCCAAG
  CCAAGAGTCA CTCAATACCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46926603	NES10671959	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30231123					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46926603	NES10671959	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121285891 () rs orientation: forward

Symbol	Name	Function Class
Rr584094	regulatory region 584094	1717 bp proximal
Slc44a3	solute carrier family 44, member 3	Intron