rs30232019 SNP Detail

Summary

• ID
  rs30232019
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121286103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGGATAA ATCATTTGGG
  ACAGGGGAAC TGGGGTCCCT GACTTCCCTC CCAAGTCACA AGGCTAAGCT CTGCAGGGCT
  TGTCTGCAGG AGGACACAGA GGTTTAGAAG CTGGGTTATC ACATGATGAG AGAGGGAACT
  TTAAAAAAAA AAGGTCCTTT GAACCCAAGC CAAGAGTCAC TCAATACCTG TTTTCAATCT
  M
  GAGACAGTCC TGCAAAGGAG AGACTAAGTT GAGTGTCTTT GAAGTCACCA CCCTTTTCTA
  TAGTCACCAG GGATACTACC TGCTATTTCT CTTCACTGCA TAACTTACTA GAGCTAAAAG
  CTCTGTCTCC CTCACAGCCA GAAAAGTCTG CCTTTAGGAA GACGATTTGA TTATTTTCCC
  CTGAAGCTGA AAAAAAAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46926609	NES10671961	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30232019					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46926609	NES10671961	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121286103 () rs orientation: forward

Symbol	Name	Function Class
Rr584094	regulatory region 584094	1505 bp proximal
Slc44a3	solute carrier family 44, member 3	Intron