rs3023308 SNP Detail

Summary

• ID
  rs3023308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  101
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74595273 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GAAGC CACATGTTGG CTCATACTAT
  Y
  TTACTCCAAT CCAGGGCATC TGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38779531	mCV23961971	ABI	CRAMUS_MOUSE	r	SNP	G	A	A	G
ss132435305	ENSMUSSNP4630582	ENSEMBL	ENSEMBL_Sanger	r	SNP	G	A		G
ss323749412	CHEV_11_74517949	CHEVERUD	SCREENING_POP	r	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3023308					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74595273 () rs orientation: reverse

Symbol	Name	Function Class
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	1541 bp upstream
Tssr109134	transcription start site region 109134	1170 bp downstream