rs30234516 SNP Detail

Summary

• ID
  rs30234516
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103289451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGCATAG ACTGTTCAGA
  GGACAGTTCT GCATGAACCA CAGGGGCTCC TACAGAATCT AGAGTCTGCT GAGGCAGTAG
  GCTGGCTGGG CAGCCAGCCT CTGGAATCTT CCCATCTCCT CCTTCCCCAC ACCCGAGTTA
  CAGATGTGTG CCACTGTGCT GGACTTTTCA TGTTGGATCC AAACGGAGGC CTTCTCTCTT
  R
  TGCTTTGCAC ACCGAGCCGT CTCCTCAGCC CCTTAGTGGT GAGCCCCTAA GTGACTGATT
  CTTTCATATT AATTTTCCAG GATAACAAGA TTTTTTATCA TGAGTAGAGC TTTTAAAACT
  TTTTTTTTTA TTTTGAAAGA AGTTCAGACT TTTGGAAAGA TTCCAAGAAT AGGCCAAAGA
  ATCCTCATAC TGCATTTATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46388287	mCV25258451	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss136877654	ENSMUSSNP992248	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30234516					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103289451 () rs orientation: forward

Symbol	Name	Function Class
D9Mit242	DNA segment, Chr 9, Massachusetts Institute of Technology 242	1115 bp proximal
Gm47328	predicted gene, 47328	105 bp downstream
Gm69201	predicted gene, 69201	within coordinates
Rr198513	regulatory region 198513	within coordinates
Rr198514	regulatory region 198514	350 bp proximal
Rr207103	regulatory region 207103	751 bp proximal